
                                               position in query-                          -position in repeat-
          %    %    %    query                                    C matching repeat        (left)  end   begin  linkage
+ score  div. del. ins.  sequence              begin  end  (left) + repeat   class/family  begin   end   (left) id/graphic

+   24   22.9  0.0  0.0  ENSMUST00000089257.6    769   824 (2276) + (GGC)n   Simple_repeat      1     56    (0)   1

ANNOTATION EVIDENCE:
   24  22.85 0.00 0.00  ENSMUST00000089257.6    769   824   2210 + (GGC)n   Simple_repeat      1     56      0    
24 22.85 0.00 0.00 ENSMUST00000089257.6 769 824 (2210) (GGC)n#Simple_repeat 1 56 (0) m_b1s252i0

  ENSMUST000000        769 GGGGGAGGCAGCGGCGCCAACGGCGCTGGCGGCGGCGGCGGCGGCACCTG 818
                             v  v   i      v ii     vi                  iv v 
  (GGC)n#Simple          1 GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGG 50

  ENSMUST000000        819 CGGCGG 824
                                 
  (GGC)n#Simple         51 CGGCGG 56

Matrix = Unknown
Transitions / transversions = 0.83 (5/6)
Gap_init rate = 0.00 (0 / 55), avg. gap size = 0.0 (0 / 0)

+   19    8.8  5.6  0.0  ENSMUST00000089257.6   1556  1591 (1509) + (CGC)n   Simple_repeat      1     38    (0)   2

ANNOTATION EVIDENCE:
   19   8.83 5.56 0.00  ENSMUST00000089257.6   1556  1591   1443 + (CGC)n   Simple_repeat      1     38      0    
19 8.83 5.56 0.00 ENSMUST00000089257.6 1556 1591 (1443) (CGC)n#Simple_repeat 1 38 (0) m_b1s252i1

  ENSMUST000000       1556 CGCCCCCGCCCCCGCCGCCGCCGCCACC-CC-CCGCCG 1591
                               v     v              i  -  -      
  (CGC)n#Simple          1 CGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCG 38

Matrix = Unknown
Transitions / transversions = 0.50 (1/2)
Gap_init rate = 0.06 (2 / 35), avg. gap size = 1.00 (2 / 2)

+   16    7.0  3.1  3.1  ENSMUST00000089257.6   2669  2700  (400) + (TTAT)n  Simple_repeat      1     32    (0)   3

ANNOTATION EVIDENCE:
   16   7.01 3.12 3.12  ENSMUST00000089257.6   2669  2700    334 + (TTAT)n  Simple_repeat      1     32      0    
16 7.01 3.12 3.12 ENSMUST00000089257.6 2669 2700 (334) (TTAT)n#Simple_repeat 1 32 (0) m_b1s252i2

  ENSMUST000000       2669 TTATTTA-TTCTTTATTTATTTATATTAATTAT 2700
                                  -  v             -   v    
  (TTAT)n#Simpl          1 TTATTTATTTATTTATTTATTTAT-TTATTTAT 32

Matrix = Unknown
Transitions / transversions = 0.00 (0/2)
Gap_init rate = 0.06 (2 / 31), avg. gap size = 1.00 (2 / 2)

+   73    1.5  0.0  0.0  ENSMUST00000089257.6   2730  2796  (304) + (TC)n    Simple_repeat      1     67    (0)   4

ANNOTATION EVIDENCE:
   73   1.52 0.00 0.00  ENSMUST00000089257.6   2730  2796    304 + (TC)n    Simple_repeat      1     67      0    
73 1.52 0.00 0.00 ENSMUST00000089257.6 2730 2796 (304) (TC)n#Simple_repeat 1 67 (0) c_b1s251i0

  ENSMUST000000       2730 TCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 2779
                                              i                              
  (TC)n#Simple_          1 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 50

  ENSMUST000000       2780 TCTCTCTCTCTCTCTCT 2796
                                            
  (TC)n#Simple_         51 TCTCTCTCTCTCTCTCT 67

Matrix = Unknown
Transitions / transversions = 1.00 (1/0)
Gap_init rate = 0.00 (0 / 66), avg. gap size = 0.0 (0 / 0)