+ 39 15.6 4.2 2.0 chr1:145315817-145346482 1484 1579 (29087) + (GACAGA)n Simple_repeat 1 98 (0) 1
ANNOTATION EVIDENCE:
39 15.61 4.17 2.04 chr1:145315817-145346482 1484 1579 28529 + (GACAGA)n Simple_repeat 1 98 0
39 15.61 4.17 2.04 chr1:145315817-145346482 1484 1579 (28529) (GACAGA)n#Simple_repeat 1 98 (0) m_b1s252i0
chr1:14531581 1484 GATAGA-ACAGGGCCAGGTAGA-AAACAATGAAAGAGA-A-AGACAGAGA 1529
i - i v iv v - i iv v - -
(GACAGA)n#Sim 1 GACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGA 50
chr1:14531581 1530 GAGAGAGAGAGACAGAGACAGAGAGAGAGAGACAGAGACAGAGACAGAGA 1579
v v -- v
(GACAGA)n#Sim 51 CAGAGACAGAGACAGAGAC--AGAGACAGAGACAGAGACAGAGACAGAGA 98
Matrix = Unknown
Transitions / transversions = 0.62 (5/8)
Gap_init rate = 0.06 (6 / 95), avg. gap size = 1.00 (6 / 6)
+ 12 17.7 5.1 0.0 chr1:145315817-145346482 3132 3157 (27509) + A-rich Low_complexity 1 28 (0) 2
ANNOTATION EVIDENCE:
12 17.73 5.13 0.00 chr1:145315817-145346482 3132 3157 27015 + (AAAG)n Simple_repeat 1 28 13
12 17.73 5.13 0.00 chr1:145315817-145346482 3132 3157 (27015) (AAAG)n#Simple_repeat 1 28 (13) m_b1s252i1
chr1:14531581 3132 AAAGAATGAAAG--AGAAAGACAGATAG 3157
v -- v v
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAG 28
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.04 (1 / 25), avg. gap size = 2.00 (2 / 1)
+ 66 3.1 0.0 0.0 chr1:145315817-145346482 3158 3222 (27444) + (AC)n Simple_repeat 1 65 (0) 3
ANNOTATION EVIDENCE:
66 3.15 0.00 0.00 chr1:145315817-145346482 3158 3222 27444 + (AC)n Simple_repeat 1 65 0
66 3.15 0.00 0.00 chr1:145315817-145346482 3158 3222 (27444) (AC)n#Simple_repeat 1 65 (0) c_b1s251i0
chr1:14531581 3158 ACACACACACACACACACACACACACACACACACACAGACACACACACAG 3207
v v
(AC)n#Simple_ 1 ACACACACACACACACACACACACACACACACACACACACACACACACAC 50
chr1:14531581 3208 ACACACACACACACA 3222
(AC)n#Simple_ 51 ACACACACACACACA 65
Matrix = Unknown
Transitions / transversions = 0.00 (0/2)
Gap_init rate = 0.00 (0 / 64), avg. gap size = 0.0 (0 / 0)
+ 12 17.7 5.1 0.0 chr1:145315817-145346482 3223 3234 (27432) + A-rich Low_complexity 29 40 (0) 4
ANNOTATION EVIDENCE:
12 17.73 5.13 0.00 chr1:145315817-145346482 3223 3234 26938 + (AAAG)n Simple_repeat 29 40 1
12 17.73 5.13 0.00 chr1:145315817-145346482 3223 3234 (26938) (AAAG)n#Simple_repeat 29 40 (1) m_b1s252i1
chr1:14531581 3223 GAGAGAGAACGA 3234
i i v
(AAAG)n#Simpl 29 AAGAAAGAAAGA 40
Matrix = Unknown
Transitions / transversions = 2.00 (2/1)
Gap_init rate = 0.00 (0 / 11), avg. gap size = 0.0 (0 / 0)
+ 29 15.1 1.9 0.0 chr1:145315817-145346482 4730 4781 (25885) + GA-rich Low_complexity 1 53 (0) 5
ANNOTATION EVIDENCE:
29 15.12 1.92 0.00 chr1:145315817-145346482 4730 4781 25391 + (GA)n Simple_repeat 1 53 0
29 15.12 1.92 0.00 chr1:145315817-145346482 4730 4781 (25391) (GA)n#Simple_repeat 1 53 (0) m_b1s252i2
chr1:14531581 4730 GAAAGAGAAAGACAGGGAGAGGGAGAGAGAGAGAGAGAGAG-GAGAAAGT 4778
i i v i i - i v
(GA)n#Simple_ 1 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50
chr1:14531581 4779 GAG 4781
(GA)n#Simple_ 51 GAG 53
Matrix = Unknown
Transitions / transversions = 2.50 (5/2)
Gap_init rate = 0.02 (1 / 51), avg. gap size = 1.00 (1 / 1)
+ 39 15.6 4.2 2.0 chr1:145315817-145346482 6246 6341 (24325) + (GACAGA)n Simple_repeat 1 98 (0) 6
ANNOTATION EVIDENCE:
39 15.61 4.17 2.04 chr1:145315817-145346482 6246 6341 23831 + (GACAGA)n Simple_repeat 1 98 0
39 15.61 4.17 2.04 chr1:145315817-145346482 6246 6341 (23831) (GACAGA)n#Simple_repeat 1 98 (0) m_b1s252i3
chr1:14531581 6246 GATAGA-ACAGGGCCAGGTAGA-AAACAATGAAAGAGA-A-AGACAGAGA 6291
i - i v iv v - i iv v - -
(GACAGA)n#Sim 1 GACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGA 50
chr1:14531581 6292 GAGAGAGAGAGACAGAGACAGAGAGAGAGAGACAGAGACAGAGACAGAGA 6341
v v -- v
(GACAGA)n#Sim 51 CAGAGACAGAGACAGAGAC--AGAGACAGAGACAGAGACAGAGACAGAGA 98
Matrix = Unknown
Transitions / transversions = 0.62 (5/8)
Gap_init rate = 0.06 (6 / 95), avg. gap size = 1.00 (6 / 6)
+ 12 17.7 5.1 0.0 chr1:145315817-145346482 7894 7919 (22747) + A-rich Low_complexity 1 28 (0) 7
ANNOTATION EVIDENCE:
12 17.73 5.13 0.00 chr1:145315817-145346482 7894 7919 22305 + (AAAG)n Simple_repeat 1 28 13
12 17.73 5.13 0.00 chr1:145315817-145346482 7894 7919 (22305) (AAAG)n#Simple_repeat 1 28 (13) m_b1s252i4
chr1:14531581 7894 AAAGAATGAAAG--AGAAAGACAGATAG 7919
v -- v v
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAG 28
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.04 (1 / 25), avg. gap size = 2.00 (2 / 1)
+ 51 3.9 0.0 0.0 chr1:145315817-145346482 7920 7972 (22694) + (AC)n Simple_repeat 1 53 (0) 8
ANNOTATION EVIDENCE:
51 3.89 0.00 0.00 chr1:145315817-145346482 7920 7972 22694 + (AC)n Simple_repeat 1 53 0
51 3.89 0.00 0.00 chr1:145315817-145346482 7920 7972 (22694) (AC)n#Simple_repeat 1 53 (0) c_b1s251i1
chr1:14531581 7920 ACACACACACACACACACACACACAGACACACACACAGACACACACACAC 7969
v v
(AC)n#Simple_ 1 ACACACACACACACACACACACACACACACACACACACACACACACACAC 50
chr1:14531581 7970 ACA 7972
(AC)n#Simple_ 51 ACA 53
Matrix = Unknown
Transitions / transversions = 0.00 (0/2)
Gap_init rate = 0.00 (0 / 52), avg. gap size = 0.0 (0 / 0)
+ 12 17.7 5.1 0.0 chr1:145315817-145346482 7973 7984 (22682) + A-rich Low_complexity 29 40 (0) 9
ANNOTATION EVIDENCE:
12 17.73 5.13 0.00 chr1:145315817-145346482 7973 7984 22240 + (AAAG)n Simple_repeat 29 40 1
12 17.73 5.13 0.00 chr1:145315817-145346482 7973 7984 (22240) (AAAG)n#Simple_repeat 29 40 (1) m_b1s252i4
chr1:14531581 7973 GAGAGAGAACGA 7984
i i v
(AAAG)n#Simpl 29 AAGAAAGAAAGA 40
Matrix = Unknown
Transitions / transversions = 2.00 (2/1)
Gap_init rate = 0.00 (0 / 11), avg. gap size = 0.0 (0 / 0)
+ 29 15.1 1.9 0.0 chr1:145315817-145346482 9480 9531 (21135) + GA-rich Low_complexity 1 53 (0) 10
ANNOTATION EVIDENCE:
29 15.12 1.92 0.00 chr1:145315817-145346482 9480 9531 20693 + (GA)n Simple_repeat 1 53 0
29 15.12 1.92 0.00 chr1:145315817-145346482 9480 9531 (20693) (GA)n#Simple_repeat 1 53 (0) m_b1s252i5
chr1:14531581 9480 GAAAGAGAAAGACAGGGAGAGGGAGAGAGAGAGAGAGAGAG-GAGAAAGT 9528
i i v i i - i v
(GA)n#Simple_ 1 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50
chr1:14531581 9529 GAG 9531
(GA)n#Simple_ 51 GAG 53
Matrix = Unknown
Transitions / transversions = 2.50 (5/2)
Gap_init rate = 0.02 (1 / 51), avg. gap size = 1.00 (1 / 1)
+ 48 5.5 0.0 0.0 chr1:145315817-145346482 11033 11089 (19577) + (AGACAG)n Simple_repeat 1 57 (0) 11
ANNOTATION EVIDENCE:
48 5.48 0.00 0.00 chr1:145315817-145346482 11033 11089 19577 + (AGACAG)n Simple_repeat 1 57 0
48 5.48 0.00 0.00 chr1:145315817-145346482 11033 11089 (19577) (AGACAG)n#Simple_repeat 1 57 (0) c_b1s251i2
chr1:14531581 11033 AGACAGAGAGAGAGAGAGAGACAGAGACAGAGAGAGAGACAGAGACAGAG 11082
v v v
(AGACAG)n#Sim 1 AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAG 50
chr1:14531581 11083 ACAGAGA 11089
(AGACAG)n#Sim 51 ACAGAGA 57
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.00 (0 / 56), avg. gap size = 0.0 (0 / 0)
+ 12 17.7 5.1 0.0 chr1:145315817-145346482 12642 12667 (17999) + A-rich Low_complexity 1 28 (0) 12
ANNOTATION EVIDENCE:
12 17.73 5.13 0.00 chr1:145315817-145346482 12642 12667 17677 + (AAAG)n Simple_repeat 1 28 13
12 17.73 5.13 0.00 chr1:145315817-145346482 12642 12667 (17677) (AAAG)n#Simple_repeat 1 28 (13) m_b1s252i6
chr1:14531581 12642 AAAGAATGAAAG--AGAAAGACAGATAG 12667
v -- v v
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAG 28
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.04 (1 / 25), avg. gap size = 2.00 (2 / 1)
+ 66 3.1 0.0 0.0 chr1:145315817-145346482 12668 12732 (17934) + (AC)n Simple_repeat 1 65 (0) 13
ANNOTATION EVIDENCE:
66 3.15 0.00 0.00 chr1:145315817-145346482 12668 12732 17934 + (AC)n Simple_repeat 1 65 0
66 3.15 0.00 0.00 chr1:145315817-145346482 12668 12732 (17934) (AC)n#Simple_repeat 1 65 (0) c_b1s251i3
chr1:14531581 12668 ACACACACACACACACACACACACACACACACACACAGACACACACACAG 12717
v v
(AC)n#Simple_ 1 ACACACACACACACACACACACACACACACACACACACACACACACACAC 50
chr1:14531581 12718 ACACACACACACACA 12732
(AC)n#Simple_ 51 ACACACACACACACA 65
Matrix = Unknown
Transitions / transversions = 0.00 (0/2)
Gap_init rate = 0.00 (0 / 64), avg. gap size = 0.0 (0 / 0)
+ 12 17.7 5.1 0.0 chr1:145315817-145346482 12733 12744 (17922) + A-rich Low_complexity 29 40 (0) 14
ANNOTATION EVIDENCE:
12 17.73 5.13 0.00 chr1:145315817-145346482 12733 12744 17600 + (AAAG)n Simple_repeat 29 40 1
12 17.73 5.13 0.00 chr1:145315817-145346482 12733 12744 (17600) (AAAG)n#Simple_repeat 29 40 (1) m_b1s252i6
chr1:14531581 12733 GAGAGAGAACGA 12744
i i v
(AAAG)n#Simpl 29 AAGAAAGAAAGA 40
Matrix = Unknown
Transitions / transversions = 2.00 (2/1)
Gap_init rate = 0.00 (0 / 11), avg. gap size = 0.0 (0 / 0)
+ 16 29.1 3.0 1.5 chr1:145315817-145346482 14232 14298 (16368) + A-rich Low_complexity 1 68 (0) 15 *
ANNOTATION EVIDENCE:
16 29.12 2.99 1.47 chr1:145315817-145346482 14232 14298 16046 + (AAAG)n Simple_repeat 1 68 0
16 29.12 2.99 1.47 chr1:145315817-145346482 14232 14298 (16046) (AAAG)n#Simple_repeat 1 68 (0) m_b1s252i7
chr1:14531581 14232 AAAGAATGAAAG--AGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAG 14279
v -- v ii ii ii i i i i
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 50
chr1:14531581 14280 AGAGAGAGGAGAAAGTAAG 14298
i -i v
(AAAG)n#Simpl 51 AGAAAGA-AAGAAAGAAAG 68
Matrix = Unknown
Transitions / transversions = 4.00 (12/3)
Gap_init rate = 0.03 (2 / 66), avg. gap size = 1.50 (3 / 2)
+ 30 14.1 1.8 0.0 chr1:145315817-145346482 14239 14294 (16372) + GA-rich Low_complexity 1 57 (0) 16
ANNOTATION EVIDENCE:
30 14.12 1.79 0.00 chr1:145315817-145346482 14239 14294 16050 + (GAGA)n Simple_repeat 1 57 0
30 14.12 1.79 0.00 chr1:145315817-145346482 14239 14294 (16050) (GAGA)n#Simple_repeat 1 57 (0) m_b1s252i9
chr1:14531581 14239 GAAAGAGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAG- 14287
i i v i i i -
(GAGA)n#Simpl 1 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50
chr1:14531581 14288 GAGAAAG 14294
i
(GAGA)n#Simpl 51 GAGAGAG 57
Matrix = Unknown
Transitions / transversions = 6.00 (6/1)
Gap_init rate = 0.02 (1 / 55), avg. gap size = 1.00 (1 / 1)
+ 48 5.5 0.0 0.0 chr1:145315817-145346482 15800 15856 (14810) + (AGACAG)n Simple_repeat 1 57 (0) 17
ANNOTATION EVIDENCE:
48 5.48 0.00 0.00 chr1:145315817-145346482 15800 15856 14810 + (AGACAG)n Simple_repeat 1 57 0
48 5.48 0.00 0.00 chr1:145315817-145346482 15800 15856 (14810) (AGACAG)n#Simple_repeat 1 57 (0) c_b1s251i4
chr1:14531581 15800 AGACAGAGAGAGAGAGAGAGACAGAGACAGAGAGAGAGACAGAGACAGAG 15849
v v v
(AGACAG)n#Sim 1 AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAG 50
chr1:14531581 15850 ACAGAGA 15856
(AGACAG)n#Sim 51 ACAGAGA 57
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.00 (0 / 56), avg. gap size = 0.0 (0 / 0)
+ 57 1.9 0.0 0.0 chr1:145315817-145346482 17435 17487 (13179) + (AC)n Simple_repeat 1 53 (0) 18
ANNOTATION EVIDENCE:
57 1.91 0.00 0.00 chr1:145315817-145346482 17435 17487 13179 + (AC)n Simple_repeat 1 53 0
57 1.91 0.00 0.00 chr1:145315817-145346482 17435 17487 (13179) (AC)n#Simple_repeat 1 53 (0) c_b1s251i5
chr1:14531581 17435 ACACACACACACACACACACACACACACACACACAGACACACACACACAC 17484
v
(AC)n#Simple_ 1 ACACACACACACACACACACACACACACACACACACACACACACACACAC 50
chr1:14531581 17485 ACA 17487
(AC)n#Simple_ 51 ACA 53
Matrix = Unknown
Transitions / transversions = 0.00 (0/1)
Gap_init rate = 0.00 (0 / 52), avg. gap size = 0.0 (0 / 0)
+ 17 29.5 4.3 0.0 chr1:145315817-145346482 18986 19054 (11612) + A-rich Low_complexity 1 72 (0) 19 *
ANNOTATION EVIDENCE:
17 29.54 4.35 0.00 chr1:145315817-145346482 18986 19054 11398 + (AAAG)n Simple_repeat 1 72 0
17 29.54 4.35 0.00 chr1:145315817-145346482 18986 19054 (11398) (AAAG)n#Simple_repeat 1 72 (0) m_b1s252i10
chr1:14531581 18986 AAAGAATGAAAG--AGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAG 19033
v -- v ii ii ii i i i i
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 50
chr1:14531581 19034 AGAGAGAGAG-GAGAAAGTAAG 19054
i i -i v
(AAAG)n#Simpl 51 AGAAAGAAAGAAAGAAAGAAAG 72
Matrix = Unknown
Transitions / transversions = 4.33 (13/3)
Gap_init rate = 0.03 (2 / 68), avg. gap size = 1.50 (3 / 2)
+ 32 13.6 1.7 0.0 chr1:145315817-145346482 18993 19050 (11616) + GA-rich Low_complexity 1 59 (0) 20
ANNOTATION EVIDENCE:
32 13.57 1.72 0.00 chr1:145315817-145346482 18993 19050 11402 + (GAGA)n Simple_repeat 1 59 0
32 13.57 1.72 0.00 chr1:145315817-145346482 18993 19050 (11402) (GAGA)n#Simple_repeat 1 59 (0) m_b1s252i12
chr1:14531581 18993 GAAAGAGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAGA 19042
i i v i i i
(GAGA)n#Simpl 1 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50
chr1:14531581 19043 G-GAGAAAG 19050
- i
(GAGA)n#Simpl 51 GAGAGAGAG 59
Matrix = Unknown
Transitions / transversions = 6.00 (6/1)
Gap_init rate = 0.02 (1 / 57), avg. gap size = 1.00 (1 / 1)
+ 48 5.5 0.0 0.0 chr1:145315817-145346482 20556 20612 (10054) + (AGACAG)n Simple_repeat 1 57 (0) 21
ANNOTATION EVIDENCE:
48 5.48 0.00 0.00 chr1:145315817-145346482 20556 20612 10054 + (AGACAG)n Simple_repeat 1 57 0
48 5.48 0.00 0.00 chr1:145315817-145346482 20556 20612 (10054) (AGACAG)n#Simple_repeat 1 57 (0) c_b1s251i6
chr1:14531581 20556 AGACAGAGAGAGAGAGAGAGACAGAGACAGAGAGAGAGACAGAGACAGAG 20605
v v v
(AGACAG)n#Sim 1 AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAG 50
chr1:14531581 20606 ACAGAGA 20612
(AGACAG)n#Sim 51 ACAGAGA 57
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.00 (0 / 56), avg. gap size = 0.0 (0 / 0)
+ 18 14.2 0.0 0.0 chr1:145315817-145346482 22165 22190 (8476) + (GA)n Simple_repeat 1 26 (0) 22
ANNOTATION EVIDENCE:
13 18.88 4.65 0.00 chr1:145315817-145346482 22165 22190 8364 + (AAAG)n Simple_repeat 1 28 17
13 18.88 4.65 0.00 chr1:145315817-145346482 22165 22190 (8364) (AAAG)n#Simple_repeat 1 28 (17) m_b1s252i13
chr1:14531581 22165 AAAGAATGAAAG--AGAAAGACAGATAG 22190
v -- v v
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAG 28
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.04 (1 / 25), avg. gap size = 2.00 (2 / 1)
18 14.21 0.00 0.00 chr1:145315817-145346482 22172 22190 8364 + (GA)n Simple_repeat 1 19 13
18 14.21 0.00 0.00 chr1:145315817-145346482 22172 22190 (8364) (GA)n#Simple_repeat 1 19 (13) m_b1s252i14
chr1:14531581 22172 GAAAGAGAAAGACAGATAG 22190
i i v v
(GA)n#Simple_ 1 GAGAGAGAGAGAGAGAGAG 19
Matrix = Unknown
Transitions / transversions = 1.00 (2/2)
Gap_init rate = 0.00 (0 / 18), avg. gap size = 0.0 (0 / 0)
+ 55 0.0 0.0 0.0 chr1:145315817-145346482 22191 22237 (8429) + (AC)n Simple_repeat 1 47 (0) 23
ANNOTATION EVIDENCE:
55 0.00 0.00 0.00 chr1:145315817-145346482 22191 22237 8429 + (AC)n Simple_repeat 1 47 0
55 0.00 0.00 0.00 chr1:145315817-145346482 22191 22237 (8429) (AC)n#Simple_repeat 1 47 (0) c_b1s251i7
chr1:14531581 22191 ACACACACACACACACACACACACACACACACACACACACACACACA 22237
(AC)n#Simple_ 1 ACACACACACACACACACACACACACACACACACACACACACACACA 47
Matrix = Unknown
Transitions / transversions = 1.00 (0/0)
Gap_init rate = 0.00 (0 / 46), avg. gap size = 0.0 (0 / 0)
+ 18 14.2 0.0 0.0 chr1:145315817-145346482 22238 22249 (8417) + (GA)n Simple_repeat 2 13 (0) 24
ANNOTATION EVIDENCE:
18 14.21 0.00 0.00 chr1:145315817-145346482 22238 22249 8305 + (GA)n Simple_repeat 20 31 1
18 14.21 0.00 0.00 chr1:145315817-145346482 22238 22249 (8305) (GA)n#Simple_repeat 20 31 (1) m_b1s252i14
chr1:14531581 22238 GAGAGAGAGAGA 22249
(GA)n#Simple_ 20 GAGAGAGAGAGA 31
Matrix = Unknown
Transitions / transversions = 1.00 (0/0)
Gap_init rate = 0.00 (0 / 11), avg. gap size = 0.0 (0 / 0)
+ 16 29.1 3.0 1.5 chr1:145315817-145346482 23742 23808 (6858) + A-rich Low_complexity 1 68 (0) 25 *
ANNOTATION EVIDENCE:
16 29.12 2.99 1.47 chr1:145315817-145346482 23742 23808 6746 + (AAAG)n Simple_repeat 1 68 0
16 29.12 2.99 1.47 chr1:145315817-145346482 23742 23808 (6746) (AAAG)n#Simple_repeat 1 68 (0) m_b1s252i16
chr1:14531581 23742 AAAGAATGAAAG--AGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAG 23789
v -- v ii ii ii i i i i
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 50
chr1:14531581 23790 AGAGAGAGGAGAAAGTAAG 23808
i -i v
(AAAG)n#Simpl 51 AGAAAGA-AAGAAAGAAAG 68
Matrix = Unknown
Transitions / transversions = 4.00 (12/3)
Gap_init rate = 0.03 (2 / 66), avg. gap size = 1.50 (3 / 2)
+ 30 14.1 1.8 0.0 chr1:145315817-145346482 23749 23804 (6862) + GA-rich Low_complexity 1 57 (0) 26
ANNOTATION EVIDENCE:
30 14.12 1.79 0.00 chr1:145315817-145346482 23749 23804 6750 + (GAGA)n Simple_repeat 1 57 0
30 14.12 1.79 0.00 chr1:145315817-145346482 23749 23804 (6750) (GAGA)n#Simple_repeat 1 57 (0) m_b1s252i18
chr1:14531581 23749 GAAAGAGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAG- 23797
i i v i i i -
(GAGA)n#Simpl 1 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50
chr1:14531581 23798 GAGAAAG 23804
i
(GAGA)n#Simpl 51 GAGAGAG 57
Matrix = Unknown
Transitions / transversions = 6.00 (6/1)
Gap_init rate = 0.02 (1 / 55), avg. gap size = 1.00 (1 / 1)
+ 40 18.9 2.2 0.0 chr1:145315817-145346482 25273 25362 (5304) + (GACAGA)n Simple_repeat 1 92 (0) 27
ANNOTATION EVIDENCE:
40 18.85 2.22 0.00 chr1:145315817-145346482 25273 25362 5192 + (GACAGA)n Simple_repeat 1 92 0
40 18.85 2.22 0.00 chr1:145315817-145346482 25273 25362 (5192) (GACAGA)n#Simple_repeat 1 92 (0) m_b1s252i19
chr1:14531581 25273 GATAGA-ACAGGGCCAGGTAGA-AAACAATGAAAGAGAAAGACAGAGAGA 25320
i - i v iv v - i iv v v v v
(GACAGA)n#Sim 1 GACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGA 50
chr1:14531581 25321 GAGAGACAGAGACAGAGAGAGAGACAGAGACAGAGACAGAGA 25362
v v
(GACAGA)n#Sim 51 CAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGA 92
Matrix = Unknown
Transitions / transversions = 0.50 (5/10)
Gap_init rate = 0.02 (2 / 89), avg. gap size = 1.00 (2 / 2)
+ 62 1.8 0.0 0.0 chr1:145315817-145346482 26941 26997 (3669) + (AC)n Simple_repeat 1 57 (0) 28
ANNOTATION EVIDENCE:
62 1.78 0.00 0.00 chr1:145315817-145346482 26941 26997 3669 + (AC)n Simple_repeat 1 57 0
62 1.78 0.00 0.00 chr1:145315817-145346482 26941 26997 (3669) (AC)n#Simple_repeat 1 57 (0) c_b1s251i8
chr1:14531581 26941 ACACACACACACACACACACACACACACACACACACACAGACACACACAC 26990
v
(AC)n#Simple_ 1 ACACACACACACACACACACACACACACACACACACACACACACACACAC 50
chr1:14531581 26991 ACACACA 26997
(AC)n#Simple_ 51 ACACACA 57
Matrix = Unknown
Transitions / transversions = 0.00 (0/1)
Gap_init rate = 0.00 (0 / 56), avg. gap size = 0.0 (0 / 0)
+ 16 29.1 3.0 1.5 chr1:145315817-145346482 28496 28562 (2104) + A-rich Low_complexity 1 68 (0) 29 *
ANNOTATION EVIDENCE:
16 29.12 2.99 1.47 chr1:145315817-145346482 28496 28562 2048 + (AAAG)n Simple_repeat 1 68 0
16 29.12 2.99 1.47 chr1:145315817-145346482 28496 28562 (2048) (AAAG)n#Simple_repeat 1 68 (0) m_b1s252i20
chr1:14531581 28496 AAAGAATGAAAG--AGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAG 28543
v -- v ii ii ii i i i i
(AAAG)n#Simpl 1 AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 50
chr1:14531581 28544 AGAGAGAGGAGAAAGTAAG 28562
i -i v
(AAAG)n#Simpl 51 AGAAAGA-AAGAAAGAAAG 68
Matrix = Unknown
Transitions / transversions = 4.00 (12/3)
Gap_init rate = 0.03 (2 / 66), avg. gap size = 1.50 (3 / 2)
+ 30 14.1 1.8 0.0 chr1:145315817-145346482 28503 28558 (2108) + GA-rich Low_complexity 1 57 (0) 30
ANNOTATION EVIDENCE:
30 14.12 1.79 0.00 chr1:145315817-145346482 28503 28558 2052 + (GAGA)n Simple_repeat 1 57 0
30 14.12 1.79 0.00 chr1:145315817-145346482 28503 28558 (2052) (GAGA)n#Simple_repeat 1 57 (0) m_b1s252i22
chr1:14531581 28503 GAAAGAGAAAGACAGGGAGAGGGAGGGAGAGAGAGAGAGAGAGAGAGAG- 28551
i i v i i i -
(GAGA)n#Simpl 1 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50
chr1:14531581 28552 GAGAAAG 28558
i
(GAGA)n#Simpl 51 GAGAGAG 57
Matrix = Unknown
Transitions / transversions = 6.00 (6/1)
Gap_init rate = 0.02 (1 / 55), avg. gap size = 1.00 (1 / 1)
+ 48 5.5 0.0 0.0 chr1:145315817-145346482 30064 30120 (546) + (AGACAG)n Simple_repeat 1 57 (0) 31
ANNOTATION EVIDENCE:
48 5.48 0.00 0.00 chr1:145315817-145346482 30064 30120 546 + (AGACAG)n Simple_repeat 1 57 0
48 5.48 0.00 0.00 chr1:145315817-145346482 30064 30120 (546) (AGACAG)n#Simple_repeat 1 57 (0) c_b1s251i9
chr1:14531581 30064 AGACAGAGAGAGAGAGAGAGACAGAGACAGAGAGAGAGACAGAGACAGAG 30113
v v v
(AGACAG)n#Sim 1 AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAG 50
chr1:14531581 30114 ACAGAGA 30120
(AGACAG)n#Sim 51 ACAGAGA 57
Matrix = Unknown
Transitions / transversions = 0.00 (0/3)
Gap_init rate = 0.00 (0 / 56), avg. gap size = 0.0 (0 / 0)