RepeatProteinMask Completed 11-Dec-2024 06:02:15 PST
Identifying Simple and Low Complexity Repeats...(masking turned off)
- Tandem Repeats: 23
Masking Repeat Proteins...
- Protein Hits = 54
Done!
10.00user 1.05system 0:11.07elapsed 99%CPU (0avgtext+0avgdata 797860maxresident)k
0inputs+1928outputs (0major+750095minor)pagefaults 0swaps
Masked Sequence
pValue Score Method SeqID Begin End Repeat Type Begin End
7.00e-04 21 WUBlastX Bta13511 2145 2267 + SLACS_TB_pol LINE/CRE 644 684
1.39e-02 38 WUBlastX Bta13511 3210 3305 + Gret1 LTR/Gypsy 383 411
1.78e-02 26 WUBlastX Bta13511 6556 6663 + Loa-1_DAn_pol LINE/LOA 26 61
1.19e-02 27 WUBlastX Bta13511 7367 7471 - Gypsy-49_BG_gag LTR/Gypsy 162 196
8.96e-03 21 WUBlastX Bta13511 8007 8087 + CR1-21_SP_pol LINE/L2 741 765
4.99e-03 30 WUBlastX Bta13511 8114 8170 - BEL-221_AA LTR/Pao 682 699
1.19e-02 20 WUBlastX Bta13511 9937 9981 - BEL-2_DPer LTR/Pao 668 682
1.29e-02 33 WUBlastX Bta13511 10601 10705 + Gypsy6_pol LTR/Gypsy 452 486
3.99e-03 30 WUBlastX Bta13511 10674 10766 + Gypsy26_AG LTR/Gypsy 584 614
8.00e-04 25 WUBlastX Bta13511 10972 11073 - Kolobok-1_FraCy DNA/Kolobok-Hyd 187 220
3.05e-02 34 WUBlastX Bta13511 19619 19651 + ERV1-6_AMi-I_2p LTR/ERV1 1140 1150
2.86e-02 20 WUBlastX Bta13511 21379 21483 + CryptonA-1_SK_y DNA/Crypton 133 162
3.00e-03 25 WUBlastX Bta13511 21426 21560 - CPSC5 LTR/Copia 459 503
2.00e-03 20 WUBlastX Bta13511 21435 21590 - BEL-598_AA LTR/Pao 1950 1999
6.00e-15 70 WUBlastX Bta13511 22720 22998 + Helitron1_CE_he RC/Helitron 129 230
1.39e-02 25 WUBlastX Bta13511 24411 24497 - EnSpm5_OS_p1 DNA/CMC-EnSpm 861 889
2.47e-02 20 WUBlastX Bta13511 26194 26247 - ATCopia24 LTR/Copia 178 195
5.98e-03 22 WUBlastX Bta13511 27325 27411 - GmCopia11 LTR/Copia 385 413
1.09e-02 21 WUBlastX Bta13511 28239 28337 - L1-1_CR_pol LINE/L1 940 972
2.76e-02 24 WUBlastX Bta13511 30357 30395 + ATCopia22 LTR/Copia 5 17
1.98e-02 26 WUBlastX Bta13511 30827 30886 - CryptonS-4_PR_y DNA/Crypton 262 281
6.98e-03 25 WUBlastX Bta13511 30968 31054 + Gypsy-22_NVi_po LTR/Gypsy 368 399
2.66e-02 28 WUBlastX Bta13511 31005 31085 - Tx1-10_AMi_pol LINE/L1-Tx1 737 763
4.99e-03 25 WUBlastX Bta13511 31317 31496 - REX1-4_XT_pol LINE/Rex-Babar 203 258
2.00e-03 22 WUBlastX Bta13511 32979 33059 + ERV3-2_Crp-I_2p LTR/ERVL 530 556
1.69e-02 21 WUBlastX Bta13511 33364 33456 - ERV10_MD_pol LTR/ERV1 1071 1101
2.57e-02 34 WUBlastX Bta13511 33503 33616 + LCCopia1 LTR/Copia 747 784
5.98e-03 29 WUBlastX Bta13511 34849 34998 + Gypsy1-SM_pol LTR/Gypsy 982 1035
9.83e-01 23 WUBlastX Bta13511 35009 35056 + Copia-24_ST LTR/Copia 40 55
2.27e-02 20 WUBlastX Bta13511 35723 35803 + BEL-597_AA LTR/Pao 153 175
1.59e-02 25 WUBlastX Bta13511 35856 35996 - HAT-7_SM DNA/hAT-hATm 578 627
1.31e-01 21 WUBlastX Bta13511 36031 36063 + ERV1-6_AMi-I_2p LTR/ERV1 1140 1150
5.98e-03 39 WUBlastX Bta13511 36127 36222 + Copia-42_VV LTR/Copia 164 194
2.76e-02 20 WUBlastX Bta13511 36581 36724 + CR1-24_BF_pol LINE/CR1-Zenon 868 915
8.96e-03 20 WUBlastX Bta13511 37015 37080 - BEL-17_CQ LTR/Pao 14 35
5.00e-04 21 WUBlastX Bta13511 38246 38305 + Copia-3_DEu LTR/Copia 420 438
3.00e-03 33 WUBlastX Bta13511 38453 38542 + Penelope_Odi_po LINE/Penelope 569 598
2.66e-02 20 WUBlastX Bta13511 38682 38729 - Academ-1_SP_tp DNA/Academ 96 111
2.37e-02 29 WUBlastX Bta13511 39794 39862 + Copia-15_DPu LTR/Copia 1173 1199
2.96e-02 21 WUBlastX Bta13511 39999 40055 - BEL-216_AA LTR/Pao 1087 1105
7.98e-01 20 WUBlastX Bta13511 40615 40671 + BEL-598_AA LTR/Pao 671 689
9.52e-02 24 WUBlastX Bta13511 40700 40744 + Gypsy-11_ST LTR/Gypsy 877 891
3.00e-03 35 WUBlastX Bta13511 41999 42097 - Crack-7_HM_pol LINE/L2 513 544
7.04e-02 21 WUBlastX Bta13511 43186 43233 + ATCopia5 LTR/Copia 625 640
1.69e-02 27 WUBlastX Bta13511 44373 44495 + Copia-12_TMe LTR/Copia 419 451
3.00e-03 26 WUBlastX Bta13511 44639 44704 + Gypsy-1_LG_pol LTR/Gypsy 165 186
2.47e-02 21 WUBlastX Bta13511 47076 47144 - Odin-3_pol LINE/Odin 1225 1247
1.39e-02 28 WUBlastX Bta13511 49055 49111 + L1-3_GM_pol LINE/L1 1124 1138
1.00e-03 36 WUBlastX Bta13511 50333 50482 - Poseidon_Ac_pol LINE/Penelope 298 355
1.31e-01 25 WUBlastX Bta13511 51636 51740 - Gypsy6_pol LTR/Gypsy 452 486
6.98e-03 41 WUBlastX Bta13511 52507 52635 - RTE-2_Gav_pol LINE/RTE-BovB 159 197
5.98e-03 39 WUBlastX Bta13511 52667 52810 - Maui_pol LINE/L2 500 546
1.69e-02 22 WUBlastX Bta13511 52742 52840 - CR1_Ele33 LINE/CR1 1165 1198
9.95e-03 29 WUBlastX Bta13511 53631 53705 - DIVER LTR/Pao 74 98